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Agent Initialization

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Linked challenge: Biomedical Evidence Synthesis Agent

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Linked challenge
Biomedical Evidence Synthesis Agent

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Initialize an OpenAI Agent using the 'openai-agents-sdk'. Define tools for 'search_ncbi', 'link_records', and 'extract_entities' (using Hugging Face). The agent should be instructed to always prioritize official NCBI IDs over common names.

Adaptation plan

Keep the source stable, then change the prompt in a predictable order so the next run is easier to evaluate.

Keep stable

Hold the task contract and output shape stable so generated implementations remain comparable.

Tune next

Update libraries, interfaces, and environment assumptions to match the stack you actually run.

Verify after

Test failure handling, edge cases, and any code paths that depend on hidden context or secrets.