implementation

Agent Initialization

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Linked challenge: Metagenomic Security & Taxonomy Agent using Google ADK and Garak

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Linked challenge

Metagenomic Security & Taxonomy Agent using Google ADK and Garak

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Initialize a Google ADK agent using `Agent.from_config`. Configure it to use Gemini 1.5 Pro and define a 'BiosecurityTool' that checks microbial IDs against the Federal Select Agent Program list.

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Hold the task contract and output shape stable so generated implementations remain comparable.

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Test failure handling, edge cases, and any code paths that depend on hidden context or secrets.

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Linked challenge

Metagenomic Security & Taxonomy Agent using Google ADK and Garak

Metagenomic data from tools like SingleM and Sandpiper provides unprecedented insight into microbial communities, but it also raises security concerns regarding the identification of regulated pathogens. In this challenge, you will build a sophisticated biological AI agent using the Google ADK (Agent Development Kit). The agent must process taxonomic identification outputs and cross-reference them against biosecurity databases to determine risk profiles. You will implement a verification pipeline that uses multimodal Gemini models to analyze both tabular taxonomic profiles and genomic sequence snippets. To ensure the agent is robust against jailbreaking or bypass attempts that might hide pathogenic identification, you will integrate Garak, an AI vulnerability scanner, to audit the agent's safety boundaries before deployment in a research environment.

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